# Maintained Software Packages This is a list of the all RCS installed software and toolchains. To learn more about a specific package please run "module spider PACKAGENAME", which will give you information about the package as well as what other modules must be loaded to get access to the software. ``` module spider ANTLR ``` | Name | Versions | | ---------------- | ------------------------------------------ | | ANTLR | ANTLR/2.7.7-Java-11, ANTLR/2.7.7-Java-17 | | AUGUSTUS | AUGUSTUS/3.5.0 | | Autoconf | Autoconf/2.71 | | Automake | Automake/1.16.5 | | Automake | GNU Standards-compliant Makefile generator | | Autotools | Autotools/20220317 | | BamTools | BamTools/2.5.2 | | BCFtools | BCFtools/1.17 | | binutils | binutils/2.38, binutils/2.40 | | binutils | GNU binary utilities | | BioPerl | BioPerl/1.7.8 | | Bison | Bison/3.8.2 | | BLAST+ | BLAST+/2.13.0 | | BLIS | BLIS/0.9.0 | | Boost | Boost/1.79.0 | | Boost.MPI | Boost.MPI/1.79.0 | | Brotli | Brotli/1.0.9 | | BWA | BWA/0.7.17 | | bzip2 | bzip2/1.0.8 | | cairo | cairo/1.17.4 | | CDO | CDO/2.0.5, CDO/2.2.2 | | CMake | CMake/3.23.1, CMake/3.26.3 | | CUDA | CUDA/11.7.0 | | cURL | cURL/7.83.0, cURL/8.0.1 | | cutadapt | cutadapt/4.2 | | DB\_File | DB\_File/1.858 | | Doxygen | Doxygen/1.9.7 | | ecBuild | ecBuild/3.8.0 | | ecCodes | ecCodes/2.24.2, ecCodes/2.31.0 | | ESMF | ESMF/8.3.0, ESMF/8.4.2 | | Exonerate | Exonerate/2.4.0 | | expat | expat/2.4.8, expat/2.5.0 | | FFTW | FFTW/3.3.10 | | FFTW\.MPI | FFTW\.MPI/3.3.10 | | flex | flex/2.6.4 | | FlexiBLAS | FlexiBLAS/3.2.0 | | fontconfig | fontconfig/2.14.0, fontconfig/2.14.2 | | foss | foss/2022a | | gaussian | gaussian/16.C.01 | | GCC | GCC/11.3.0, GCC/12.3.0 | | GCCcore | GCCcore/11.3.0, GCCcore/12.3.0 | | GDAL | GDAL/3.5.0 | | GeneMark-ET | GeneMark-ET/4.71 | | GEOS | GEOS/3.10.3 | | gettext | gettext/0.21 | | Ghostscript | Ghostscript/10.0.0 | | git | git/2.36.0-nodocs | | GLib | GLib/2.72.1 | | gompi | gompi/2022a | | groff | groff/1.22.4 | | GSL | GSL/2.7 | | gzip | gzip/1.12 | | h5py | h5py/3.7.0 | | HarfBuzz | HarfBuzz/5.3.1 | | HDF | HDF/4.2.15 | | HDF5 | HDF5/1.13.1, HDF5/1.14.0 | | help2man | help2man/1.49.2 | | HMMER | HMMER/3.3.2 | | HTSlib | HTSlib/1.17 | | hwloc | hwloc/2.7.1 | | iimpi | iimpi/2023a | | ImageMagick | ImageMagick/7.1.0-53 | | imkl | imkl/2023.1.0 | | imkl-FFTW | imkl-FFTW/2022.1.0, imkl-FFTW/2023.1.0 | | impi | impi/2021.6.0, impi/2021.9.0 | | intel | intel/2022a, intel/2023a | | intel-compilers | intel-compilers/2023.1.0 | | ISA-L | ISA-L/2.30.0 | | JasPer | JasPer/2.0.33, JasPer/4.0.0 | | Java | Java/11.0.16, Java/17.0.6 | | LAME | LAME/3.100 | | LAPACK | LAPACK/3.10.1 | | libaec | libaec/1.0.6 | | libdap | libdap/3.20.8, libdap/3.20.11 | | libfabric | libfabric/1.15.1 | | libffi | libffi/3.4.2 | | libgeotiff | libgeotiff/1.7.1 | | libgit2 | libgit2/1.5.0 | | libreadline | libreadline/8.1.2 | | LibTIFF | LibTIFF/4.3.0, LibTIFF/4.5.0 | | libtool | libtool/2.4.7 | | LittleCMS | LittleCMS/2.14 | | LLVM | LLVM/15.0.5 | | LMDB | LMDB/0.9.29 | | lpsolve | lpsolve/5.5.2.11 | | lz4 | lz4/1.9.3, lz4/1.9.4 | | M4 | M4/1.4.19 | | MAKER | MAKER/3.01.04 | | MATLAB | MATLAB/R2023b | | METIS | METIS/5.1.0 | | MPFR | MPFR/4.2.0 | | mpi4py | mpi4py/3.1.4 | | ncbi-blast+ | ncbi-blast+/2.8.1 | | NCO | NCO/5.0.3, NCO/5.1.3 | | ncurses | ncurses/6.2, ncurses/6.3, ncurses/6.4 | | ncview | ncview/2.1.8 | | netCDF | netCDF/4.9.0, netCDF/4.9.2 | | netCDF-C++4 | netCDF-C++4/4.3.1 | | netCDF-Fortran | netCDF-Fortran/4.5.4, netCDF-Fortran/4.6.1 | | nodejs | nodejs/18.12.1 | | numactl | numactl/2.0.14 | | OpenBLAS | OpenBLAS/0.3.20 | | OpenMPI | OpenMPI/4.1.4 | | OpenSSL | OpenSSL/1.1 | | Pango | Pango/1.50.12 | | ParaView | ParaView/5.11.1 | | PCRE2 | PCRE2/10.40 | | Perl | Perl/5.34.1, Perl/5.36.1 | | Perl-bundle-CPAN | Perl-bundle-CPAN/5.36.1 | | pigz | pigz/2.7 | | pkgconf | pkgconf/1.8.0, pkgconf/1.9.5 | | pkgconfig | pkgconfig/1.5.5-python | | pmi | pmi/pmix-x86\_64 | | PMIx | PMIx/4.1.2 | | PROJ | PROJ/9.0.0, PROJ/9.2.0 | | pybind11 | pybind11/2.9.2 | | Python | Python/3.10.4, Python/3.11.3 | | python-isal | python-isal/1.1.0 | | R | R/4.2.2 | | RepeatMasker | RepeatMasker/4.1.4 | | RMBlast | RMBlast/2.13.0 | | Rust | Rust/1.60.0 | | SAMtools | SAMtools/1.17 | | ScaLAPACK | ScaLAPACK/2.2.0-fb | | SciPy-bundle | SciPy-bundle/2022.05 | | SCons | SCons/4.2.0 | | Serf | Serf/1.3.9 | | sintr | sintr/1.0 | | slurm | slurm/22.05.4 | | SNAP-HMM | SNAP-HMM/20221022 | | SQLite | SQL Database Engine in a C Library | | SQLite | SQLite/3.38.3, SQLite/3.42.0 | | Subversion | Subversion/1.14.1 | | SuiteSparse | SuiteSparse/5.13.0-METIS-5.1.0 | | SWIG | SWIG/4.0.2 | | Szip | Szip/2.1.1 | | Tk | Tk/8.6.12 | | totalview | totalview/2023.1.6 | | TRF | TRF/4.09.1 | | UCX | UCX/1.12.1 | | UDUNITS | UDUNITS/2.2.28 | | UnZip | UnZip/6.0 | | util-linux | util-linux/2.38, util-linux/2.39 | | Vivado | Vivado/2023.2 | | X11 | X11/20220504, X11/20230603 | | XML-LibXML | XML-LibXML/2.0207 | | zlib | zlib/1.2.12, zlib/1.2.13 | | zstd | zstd/1.5.2 |