Maintained Software Packages

This is a list of the all RCS installed software and toolchains. To learn more about a specific package please run "module spider PACKAGENAME", which will give you information about the package as well as what other modules must be loaded to get access to the software.

module spider ANTLR

Name	Versions
ANTLR	ANTLR/2.7.7-Java-11, ANTLR/2.7.7-Java-17
AUGUSTUS	AUGUSTUS/3.5.0
Autoconf	Autoconf/2.71
Automake	Automake/1.16.5
Automake	GNU Standards-compliant Makefile generator
Autotools	Autotools/20220317
BamTools	BamTools/2.5.2
BCFtools	BCFtools/1.17
binutils	binutils/2.38, binutils/2.40
binutils	GNU binary utilities
BioPerl	BioPerl/1.7.8
Bison	Bison/3.8.2
BLAST+	BLAST+/2.13.0
BLIS	BLIS/0.9.0
Boost	Boost/1.79.0
Boost.MPI	Boost.MPI/1.79.0
Brotli	Brotli/1.0.9
BWA	BWA/0.7.17
bzip2	bzip2/1.0.8
cairo	cairo/1.17.4
CDO	CDO/2.0.5, CDO/2.2.2
CMake	CMake/3.23.1, CMake/3.26.3
CUDA	CUDA/11.7.0
cURL	cURL/7.83.0, cURL/8.0.1
cutadapt	cutadapt/4.2
DB_File	DB_File/1.858
Doxygen	Doxygen/1.9.7
ecBuild	ecBuild/3.8.0
ecCodes	ecCodes/2.24.2, ecCodes/2.31.0
ESMF	ESMF/8.3.0, ESMF/8.4.2
Exonerate	Exonerate/2.4.0
expat	expat/2.4.8, expat/2.5.0
FFTW	FFTW/3.3.10
FFTW.MPI	FFTW.MPI/3.3.10
flex	flex/2.6.4
FlexiBLAS	FlexiBLAS/3.2.0
fontconfig	fontconfig/2.14.0, fontconfig/2.14.2
foss	foss/2022a
gaussian	gaussian/16.C.01
GCC	GCC/11.3.0, GCC/12.3.0
GCCcore	GCCcore/11.3.0, GCCcore/12.3.0
GDAL	GDAL/3.5.0
GeneMark-ET	GeneMark-ET/4.71
GEOS	GEOS/3.10.3
gettext	gettext/0.21
Ghostscript	Ghostscript/10.0.0
git	git/2.36.0-nodocs
GLib	GLib/2.72.1
gompi	gompi/2022a
groff	groff/1.22.4
GSL	GSL/2.7
gzip	gzip/1.12
h5py	h5py/3.7.0
HarfBuzz	HarfBuzz/5.3.1
HDF	HDF/4.2.15
HDF5	HDF5/1.13.1, HDF5/1.14.0
help2man	help2man/1.49.2
HMMER	HMMER/3.3.2
HTSlib	HTSlib/1.17
hwloc	hwloc/2.7.1
iimpi	iimpi/2023a
ImageMagick	ImageMagick/7.1.0-53
imkl	imkl/2023.1.0
imkl-FFTW	imkl-FFTW/2022.1.0, imkl-FFTW/2023.1.0
impi	impi/2021.6.0, impi/2021.9.0
intel	intel/2022a, intel/2023a
intel-compilers	intel-compilers/2023.1.0
ISA-L	ISA-L/2.30.0
JasPer	JasPer/2.0.33, JasPer/4.0.0
Java	Java/11.0.16, Java/17.0.6
LAME	LAME/3.100
LAPACK	LAPACK/3.10.1
libaec	libaec/1.0.6
libdap	libdap/3.20.8, libdap/3.20.11
libfabric	libfabric/1.15.1
libffi	libffi/3.4.2
libgeotiff	libgeotiff/1.7.1
libgit2	libgit2/1.5.0
libreadline	libreadline/8.1.2
LibTIFF	LibTIFF/4.3.0, LibTIFF/4.5.0
libtool	libtool/2.4.7
LittleCMS	LittleCMS/2.14
LLVM	LLVM/15.0.5
LMDB	LMDB/0.9.29
lpsolve	lpsolve/5.5.2.11
lz4	lz4/1.9.3, lz4/1.9.4
M4	M4/1.4.19
MAKER	MAKER/3.01.04
MATLAB	MATLAB/R2023b
METIS	METIS/5.1.0
MPFR	MPFR/4.2.0
mpi4py	mpi4py/3.1.4
ncbi-blast+	ncbi-blast+/2.8.1
NCO	NCO/5.0.3, NCO/5.1.3
ncurses	ncurses/6.2, ncurses/6.3, ncurses/6.4
ncview	ncview/2.1.8
netCDF	netCDF/4.9.0, netCDF/4.9.2
netCDF-C++4	netCDF-C++4/4.3.1
netCDF-Fortran	netCDF-Fortran/4.5.4, netCDF-Fortran/4.6.1
nodejs	nodejs/18.12.1
numactl	numactl/2.0.14
OpenBLAS	OpenBLAS/0.3.20
OpenMPI	OpenMPI/4.1.4
OpenSSL	OpenSSL/1.1
Pango	Pango/1.50.12
ParaView	ParaView/5.11.1
PCRE2	PCRE2/10.40
Perl	Perl/5.34.1, Perl/5.36.1
Perl-bundle-CPAN	Perl-bundle-CPAN/5.36.1
pigz	pigz/2.7
pkgconf	pkgconf/1.8.0, pkgconf/1.9.5
pkgconfig	pkgconfig/1.5.5-python
pmi	pmi/pmix-x86_64
PMIx	PMIx/4.1.2
PROJ	PROJ/9.0.0, PROJ/9.2.0
pybind11	pybind11/2.9.2
Python	Python/3.10.4, Python/3.11.3
python-isal	python-isal/1.1.0
R	R/4.2.2
RepeatMasker	RepeatMasker/4.1.4
RMBlast	RMBlast/2.13.0
Rust	Rust/1.60.0
SAMtools	SAMtools/1.17
ScaLAPACK	ScaLAPACK/2.2.0-fb
SciPy-bundle	SciPy-bundle/2022.05
SCons	SCons/4.2.0
Serf	Serf/1.3.9
sintr	sintr/1.0
slurm	slurm/22.05.4
SNAP-HMM	SNAP-HMM/20221022
SQLite	SQL Database Engine in a C Library
SQLite	SQLite/3.38.3, SQLite/3.42.0
Subversion	Subversion/1.14.1
SuiteSparse	SuiteSparse/5.13.0-METIS-5.1.0
SWIG	SWIG/4.0.2
Szip	Szip/2.1.1
Tk	Tk/8.6.12
totalview	totalview/2023.1.6
TRF	TRF/4.09.1
UCX	UCX/1.12.1
UDUNITS	UDUNITS/2.2.28
UnZip	UnZip/6.0
util-linux	util-linux/2.38, util-linux/2.39
Vivado	Vivado/2023.2
X11	X11/20220504, X11/20230603
XML-LibXML	XML-LibXML/2.0207
zlib	zlib/1.2.12, zlib/1.2.13
zstd	zstd/1.5.2