Maintained Software Packages
This is a list of the all RCS installed software and toolchains. To learn more about a specific package please run "module spider PACKAGENAME", which will give you information about the package as well as what other modules must be loaded to get access to the software.
ANTLR
ANTLR/2.7.7-Java-11, ANTLR/2.7.7-Java-17
AUGUSTUS
AUGUSTUS/3.5.0
Autoconf
Autoconf/2.71
Automake
Automake/1.16.5
Automake
GNU Standards-compliant Makefile generator
Autotools
Autotools/20220317
BamTools
BamTools/2.5.2
BCFtools
BCFtools/1.17
binutils
binutils/2.38, binutils/2.40
binutils
GNU binary utilities
BioPerl
BioPerl/1.7.8
Bison
Bison/3.8.2
BLAST+
BLAST+/2.13.0
BLIS
BLIS/0.9.0
Boost
Boost/1.79.0
Boost.MPI
Boost.MPI/1.79.0
Brotli
Brotli/1.0.9
BWA
BWA/0.7.17
bzip2
bzip2/1.0.8
cairo
cairo/1.17.4
CDO
CDO/2.0.5, CDO/2.2.2
CMake
CMake/3.23.1, CMake/3.26.3
CUDA
CUDA/11.7.0
cURL
cURL/7.83.0, cURL/8.0.1
cutadapt
cutadapt/4.2
DB_File
DB_File/1.858
Doxygen
Doxygen/1.9.7
ecBuild
ecBuild/3.8.0
ecCodes
ecCodes/2.24.2, ecCodes/2.31.0
ESMF
ESMF/8.3.0, ESMF/8.4.2
Exonerate
Exonerate/2.4.0
expat
expat/2.4.8, expat/2.5.0
FFTW
FFTW/3.3.10
FFTW.MPI
FFTW.MPI/3.3.10
flex
flex/2.6.4
FlexiBLAS
FlexiBLAS/3.2.0
fontconfig
fontconfig/2.14.0, fontconfig/2.14.2
foss
foss/2022a
gaussian
gaussian/16.C.01
GCC
GCC/11.3.0, GCC/12.3.0
GCCcore
GCCcore/11.3.0, GCCcore/12.3.0
GDAL
GDAL/3.5.0
GeneMark-ET
GeneMark-ET/4.71
GEOS
GEOS/3.10.3
gettext
gettext/0.21
Ghostscript
Ghostscript/10.0.0
git
git/2.36.0-nodocs
GLib
GLib/2.72.1
gompi
gompi/2022a
groff
groff/1.22.4
GSL
GSL/2.7
gzip
gzip/1.12
h5py
h5py/3.7.0
HarfBuzz
HarfBuzz/5.3.1
HDF
HDF/4.2.15
HDF5
HDF5/1.13.1, HDF5/1.14.0
help2man
help2man/1.49.2
HMMER
HMMER/3.3.2
HTSlib
HTSlib/1.17
hwloc
hwloc/2.7.1
iimpi
iimpi/2023a
ImageMagick
ImageMagick/7.1.0-53
imkl
imkl/2023.1.0
imkl-FFTW
imkl-FFTW/2022.1.0, imkl-FFTW/2023.1.0
impi
impi/2021.6.0, impi/2021.9.0
intel
intel/2022a, intel/2023a
intel-compilers
intel-compilers/2023.1.0
ISA-L
ISA-L/2.30.0
JasPer
JasPer/2.0.33, JasPer/4.0.0
Java
Java/11.0.16, Java/17.0.6
LAME
LAME/3.100
LAPACK
LAPACK/3.10.1
libaec
libaec/1.0.6
libdap
libdap/3.20.8, libdap/3.20.11
libfabric
libfabric/1.15.1
libffi
libffi/3.4.2
libgeotiff
libgeotiff/1.7.1
libgit2
libgit2/1.5.0
libreadline
libreadline/8.1.2
LibTIFF
LibTIFF/4.3.0, LibTIFF/4.5.0
libtool
libtool/2.4.7
LittleCMS
LittleCMS/2.14
LLVM
LLVM/15.0.5
LMDB
LMDB/0.9.29
lpsolve
lpsolve/5.5.2.11
lz4
lz4/1.9.3, lz4/1.9.4
M4
M4/1.4.19
MAKER
MAKER/3.01.04
MATLAB
MATLAB/R2023b
METIS
METIS/5.1.0
MPFR
MPFR/4.2.0
mpi4py
mpi4py/3.1.4
ncbi-blast+
ncbi-blast+/2.8.1
NCO
NCO/5.0.3, NCO/5.1.3
ncurses
ncurses/6.2, ncurses/6.3, ncurses/6.4
ncview
ncview/2.1.8
netCDF
netCDF/4.9.0, netCDF/4.9.2
netCDF-C++4
netCDF-C++4/4.3.1
netCDF-Fortran
netCDF-Fortran/4.5.4, netCDF-Fortran/4.6.1
nodejs
nodejs/18.12.1
numactl
numactl/2.0.14
OpenBLAS
OpenBLAS/0.3.20
OpenMPI
OpenMPI/4.1.4
OpenSSL
OpenSSL/1.1
Pango
Pango/1.50.12
ParaView
ParaView/5.11.1
PCRE2
PCRE2/10.40
Perl
Perl/5.34.1, Perl/5.36.1
Perl-bundle-CPAN
Perl-bundle-CPAN/5.36.1
pigz
pigz/2.7
pkgconf
pkgconf/1.8.0, pkgconf/1.9.5
pkgconfig
pkgconfig/1.5.5-python
pmi
pmi/pmix-x86_64
PMIx
PMIx/4.1.2
PROJ
PROJ/9.0.0, PROJ/9.2.0
pybind11
pybind11/2.9.2
Python
Python/3.10.4, Python/3.11.3
python-isal
python-isal/1.1.0
R
R/4.2.2
RepeatMasker
RepeatMasker/4.1.4
RMBlast
RMBlast/2.13.0
Rust
Rust/1.60.0
SAMtools
SAMtools/1.17
ScaLAPACK
ScaLAPACK/2.2.0-fb
SciPy-bundle
SciPy-bundle/2022.05
SCons
SCons/4.2.0
Serf
Serf/1.3.9
sintr
sintr/1.0
slurm
slurm/22.05.4
SNAP-HMM
SNAP-HMM/20221022
SQLite
SQL Database Engine in a C Library
SQLite
SQLite/3.38.3, SQLite/3.42.0
Subversion
Subversion/1.14.1
SuiteSparse
SuiteSparse/5.13.0-METIS-5.1.0
SWIG
SWIG/4.0.2
Szip
Szip/2.1.1
Tk
Tk/8.6.12
totalview
totalview/2023.1.6
TRF
TRF/4.09.1
UCX
UCX/1.12.1
UDUNITS
UDUNITS/2.2.28
UnZip
UnZip/6.0
util-linux
util-linux/2.38, util-linux/2.39
Vivado
Vivado/2023.2
X11
X11/20220504, X11/20230603
XML-LibXML
XML-LibXML/2.0207
zlib
zlib/1.2.12, zlib/1.2.13
zstd
zstd/1.5.2
Last updated